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Accession Number |
TCMCG006C59265 |
gbkey |
CDS |
Protein Id |
XP_013720234.1 |
Location |
join(2236781..2236843,2236917..2237987,2238124..2239280,2239369..2239509,2239849..2240092,2240175..2240876,2241077..2241271,2241383..2241969,2242095..2242146,2242229..2242847,2243019..2243200,2243273..2243805,2243902..2244006,2244097..2244163,2244258..2244335,2244425..2244493,2244587..2244658) |
Gene |
LOC106424042 |
GeneID |
106424042 |
Organism |
Brassica napus |
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Length |
1978aa |
Molecule type |
protein |
Topology |
linear |
Data_file_division |
PLN |
dblink |
BioProject:PRJNA293435 |
db_source |
XM_013864780.2
|
Definition |
E3 ubiquitin-protein ligase PRT6-like [Brassica napus] |
CDS: ATGGAGACCGACTCGCCTCTCTTCGGTTCATTTCTCCCCAGTTCACACGATTCCCTCCTCGAGAGGCTTGCCTTCGTTGGAGTACCTAAAGAACGCTGCTCCAAACAAGCTCTAGTGGAGTTCGTTAGAGCTAACCCTTCCAAAATCTCGGAGATCGTCTCTGCTCTCTTACCTACCGATGAGGAAGTTAAATCCGAATTGAAGGAAACGAGGGAACGGTCTCGGAAGAAGAGGTTTAGTGAGGCTATGAATTGGCTTCAGTGGCTGATGTTCCAGGACGATCCTGGCGTTTCCTTGAGCAATCTCGCTGAGTTGAATGTTGATCAGCGAGGTGTTTGTGGCTCCGTATGGGGACACAATGATATAGCGTATAAGTGTAGGACGTGCGAGAATGATCCGACTTGTGCTATCTGCGTGCCTTGTTTCGAGAATGGGGATCACGAGCTCCACGATTATTCGGTTATTTACACTGGCGGTGGTTGCTGTGATTGTGGGGACGAGACGGCGTGGAAACGGGAGGGTTTCTGTTCCAAGCATAAAGGTTCTGAACAGATCCAGCCCCTCCCTGAGAATCTAGCGAACTCGGTTGGGCCTGTGCTTGATGCGCTTTTTGCTTGTTGGAGTGGCAAGCTCTCATCTGCAGAGAGTATTGTTCAGAAAGATGCTCTTGTAGTAGTACTCCAGAAGATGTCAAACGAGTTGACATTTGCGGTGGTTGAAATGCTTCTGGAATTTAGTCAGTCCACTGAGAGTCTGCTGAGTTTCGTTGCTAGAAGGATTATCTCTTCAGGTGGTCTGCTGAATTATCTCGTGAAGGCTGAGAGGTTCTTGGACCAAGATGTAACCAGGAAACTACATGACTTGTTCCTCAAATTGATAGCAGATCCAGTCTTTAAGTCGGAATTTGCAAAAGCATTTGCGAGTTACTATCCAGTTGTGATAAGTGAAGCGGTTAAGCTGGGGAGTGATAATGCATTCAAGAAATTTCCACTGCTGTCTGCATTTTCTGTGCAAATCCTCACGGTGCCAACTCTAACACCATTTCTGGTGAAGGAAATGAATTTTCTGGCTATGCTTTTGGGATGCCTCAATGATATCTTTGTTTCTTGTTCTGGAGAGGATGGTGTGCTACAGGCTACGAAGTGGGAACGGATGTCTGAGATAAGTGACCGTGTCATGGCAGACTTGAAATTTGTTACGAGCCATGTTGTAGTTTCCAAGTATGCAACACATGAACATCGGGAGTTATCAAGATCATGGTTGCTACTCATGACCTTTGCTCAAGGAATGAATCGTATAAAAAGAGAGACTGGAATCCATATTGAAGACGATAATGAGTATATGCATTTATTCTTTGTTTTGGGTCATTCAATAGCTGTTATTCACTCTCTGTTGGTTACTGGTACATATTCTGCTGCCAATGATAAAGAAATAGAAAATGAGGGAACCACCAAGGCAGGACTTGACAAGTGTGATGGAGATGGAGAAAGGTATGCAAAAGTTGGGAGATTGTCTCATGAAGATTCGGTATGTACTGCAATGGTAAGCAGCAGCTCCTCTGATAGCTCGATAGTCCCTGAAAACAAAATTGACCCTTTCCGTGCGCGTCTTCCTTCTTCTGCCATATGGTTGATACGCGAGTGTTTGAAAGTTCTGGAGACATGCTTAGTAGATGATGAAGGTATATCAATATTTCTTTGCAGAAACGTCTCTGGCAGCACGATGTCATGGCCAAAGAGAAAATTTTCAAAGGTTGAAATTGGAAGAAGTGTATCCAGTAGTCTTGCCAGTTCTAGCAGAGATCCGAGTACTGGCTTATCACCTCTATGTGGCGATATACAAACAAATCTTAGCTTGGATAATGTTGATGGATCGAATGGGGAGGTTCAGAACTCTAGGAGAGTATCTTGCAACTCTTCCTATCCGAATGCATCCGGAGTACATATACTTGGTCTGTGTGATTGGCCGGACATTCTATACGATGTGAGCTCTCAGCCCATATCAGTTCATCTACCGTTACACCGGTTACTATCTTTGCTCTTACAAAAAGCATTAGAGAGGTGTTATGGAGAATCGGCATTGCACCATGGAGTTAATGTTAGTCATGAGATCCCACAGGCTGACTTCTTCAGCTACGTGATAGGAGATTTCCATCCTTATGGATTTTCTGCACTTGTTATGGAGCATGTGCTCCGCATTAGGGTATTCTGTGCCCAAGTTATTGCTGGAATGTGGAAGAAGAATGCGGATTCTGCGTTAGTAACTTGCGAGTTGTATCGGTCAGTTTGCTGGTCAGAACAGGGACTTGAGCTTGATCTATTTCTTCTGCAGTGTTGTGGTGCGTTGGCTCCCGCAGATTCTTATGTTAATAAGCTTCTCGACCGATTTGGGCTCTCGAGCTATCTTTCACTAAACCCCAATATGACAAATGAGTATGAAGCAGTTTTGGTCCAGGAAATGCTTGCTCTTCTGATACAGATCCTGCAAGAAAGGCGATTTTGTGGTCTTTCTACTGTTGAAAGTTTGAGAAGAGAGATCATATTCAAGTTAGCCACTGGAGATTTCACTCATAGTCAATTGGTCAAATCTTTACCCCGTGACCTGTCCAAGTCGGATGAGCTCCAGGAGGTCTTAGACAACGTTTCAGTATATTGTAATCCATCCGGCATGAACCAGGGAAAGTATTCACTACGGTCATCTTGTTGGAAGGAATTGGATCTCTACCACCCTCGTTGGCATTCGAGAGAGTTGCAATCTGCAGAAGAAAGATTTTCACGCTATTGTGGAGTGTCTGCGGTGACCACTCAGCTTCCTAGGTGGAGAATGATCTATCCGCCGCTAAAGGGACTTTCTAGAATCGGCACTTGCAAAGCCACATTTCAAATCATTTGCTCTACTTTATACTACGCACTACAGAGTGGTTCATCTGTTAAATCACGCGCTCAAGATGGCGTTCTCATAAGTGCATTGCACTTACTCTCGTTATCATTGGATATTTGCACTCAGCAAAGGGGATCTAATATTCAGGCTTGTTGCGTAGAAGATTCTATTCCGATTCTCGAATTAGCTGGTCTAGAAATAATTGGTCTAAATCAAGGGACTGGAAAAGAAAGTTTGTTGTCTCTTCTTGTTTCATTAATGAGGACCCGTGAAGGAGATGGTCTCCATCAATTTCCAGAGGCAGGCAGTTGTAATATTTCGTCCTGGATTGGAAACTTGCTCAAGAAGTTCAGTGAAATTGATTCTGTTTGTATGAACCTATTGCAAAGTCTTGCCCCGGAGGTGGTCGGTCACTCTGTCTTTGACAAAGCCACATCAGGCTCTGCTTCTGATGACACACGCAAGGCTAAAGCTAGAGAGAGGCAGGCTGCTATTCTGGCAAAAATGAAAGCTGAACAATCAAAATTCTTGTCTACAATGAGTTCCAGCATGGATGATGATGATCTAAGATCTGAAACTGAAACAAGTGATTCCGTAGTGGAACATGATTCAGAAATTGCTATTCGTGAAGTCTGCTCCTTCTGCCATGACCCAGATTCCAAAGACTCGGTTTCTTTCTTGATTTTTCTCCAGAAATCTAAACTTTTGAGTTTTGTGAATAGAGGCCCTCCATCTTGGGATCAATGTCCACAATCTGAAAAGAAGATACCCATGGATGAAGCTCCCGATCTCCAGAGAATAAATGTTTCCTCAGACAGTTTAAGAATGATTTCTCATGTGCTGCAGCTGTCAGATGATGCAACCTCCGAGTCTGCTACAGATTATGTGCTTGAGGCTTTAACAGCCCGGCTTTTAGGGAATGGTCAGAAGGAGAAGAGGTCTAGCGATGCGAGGGGAAAAGATGAATCTAACTTGGAGTCATTGGAAACAGCTATGTATCAAACTGTTCGCAAAAAAACTGAAAACATGATAAATCAAAGCCTTACACATGTAAATCATCGACAGCCTGATTCTGAAAGTAGTTCGGAGAGGAGTTCCGTTGGTGGTCTATCTACTTTGCATAGGTTTCAAGATATTCGATCAAAACAAACCTCCAGATATCTGGATGTCAGTGCAGATGGGTTTCACCCTGCCGACTGTGATGGGATTTATCTTTCATCATGTGGACATGCTGTGCATCAAAGCTGTCTTGAACGATATTTAAACTCGTTAAAAGAAAGGTCTGACAGGAGAAATGTTTTTGAAGGTGCACATATAGTGGATCTTGTACAGGGAGAATTTCTCTGTCCTGCATGCCGCCGACTAGCTAATTCTGTGTTGCCTGCATGTCCTGTAGACCTATGTTCTGTATCAAAGCTACAAGAAAGTTCGCATGCTAAGTTAGGTAGATTAGATGAACAGATACCTTCTCTTTTGCTCTCTGAAGCGTTGTGTCTACTACAGTTTGCTGCTAACGTGATCGAAGATGGTGATACTCTTAAAACAGTATCTCTGCAGGGAGATGAGCCAAGAAGAAAAGATCTTCAATCTGTCTCCAACAAGCTCTGGAATTTCTATTTTTCTAAGCGACAGGAAAAACCTCCGGGAAGTTCTTGGCTACCACAATCGATCATCATGTGGGACACCCTTAAGTGCTCTCTAATTTCAATGGAAATTGTGACTCGTTGTGCGAAGAATACAATGCTTCCTGTCTATGGTATTGACTCCTTGTATGAAGAGTTTAAAACCTCTAAGGGAATTGCTTTGTCACTCTTATTACGAGTGGTACAGAGCACCCGGACAAAGAATGCTTTACATGTTCGTCAGAGATTTATGGGTATGAAATATCTTGCGGAGTCTATATGCTCTGGAATCTCAAGTACTTCTTCAAGCAGCATATTTGAAAGTGAAGGCGCAGCAGGTTCGTGGAAGAATATAAACCTGCTATGGAGTCGAGCATCTGATCCAGTTCTTGCCCATGACCCATTTTCATCACTGATGTGGGCTCTCTTTTGTCTCCCATCTCCTTTCATCACATGCGAGGAATCTCTATTATCAATTGTGCATATTTTCTACAGTGTCTCTGTTATTCAGACTGTAATTACATATTGTGCAGGTCGCCTGTGTTACACTAGTGAGTTAGATTTCAAAGAAAATCTGCTTAGCGACATCTCCATAGCTTTGAGAGAATCAGGTGGTTGGGAGTATTTCAGGTCTAATAATATGGATTTATCATGTGATATAAAAGAGACGATCCGTAAATATAGTCTTCCTTTTCTGAGGAGATGTGCGTTGTTGTGGAGGTTACTTAAAACTGCGCCTGGGAAGTTTCATGAAGAGGTACATATGTTCGATGTGCCATCTGACTCCAACAGCGACTATATGGATTTCATGTATAGTCCTCAATCTGAGCTGAAGCATGTGGATGAACTGGAGAAAATGTTCAAGATTCCTCCCATTGATACCGTTATCAATGATGAACTTCTCTGGTCTTCATCGCAAACATGGCTTCGACATTTCCAGATGGAATACAGAGTCAACAGAGTCAAAGGGCCCCTTTGCATAACCCCTTTAGTTCCTTTCCAGCTTATGAAATTACCCAATCTATACCAGGACCTATTGCAAAGGTATATTAAAAAGCCTTGCAGCAATTGCACGAAAGTTATTGAAGAACCTGCACTATGTCTTCTCTGTGGAAGATTGTGTTCTCCTATATGGAGACCTTGTTGTAGAGAAAGTGGTTGTCAGACTCATGCAGTCACATGTGGTGCTGGTACTGGTGTATATCTTCTGATACGGCGGACTACAATTTTGCTACAAAGATTTGCAAGACAATCACCTTGGCCATCTCCTTATTTGGATACATTTGGAGAAGAGGATATTGAGATGGCCAGAGGGAAACCACTATACCTGAATGAAGAACGCTATGCTGCGTTAACATACATGGTTGGATCTCATGGACTCGATCACAGCTCGAAAGTTCTCAACCAAACCACAATCGGAGCCTTCTTAACTTAA 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Protein: METDSPLFGSFLPSSHDSLLERLAFVGVPKERCSKQALVEFVRANPSKISEIVSALLPTDEEVKSELKETRERSRKKRFSEAMNWLQWLMFQDDPGVSLSNLAELNVDQRGVCGSVWGHNDIAYKCRTCENDPTCAICVPCFENGDHELHDYSVIYTGGGCCDCGDETAWKREGFCSKHKGSEQIQPLPENLANSVGPVLDALFACWSGKLSSAESIVQKDALVVVLQKMSNELTFAVVEMLLEFSQSTESLLSFVARRIISSGGLLNYLVKAERFLDQDVTRKLHDLFLKLIADPVFKSEFAKAFASYYPVVISEAVKLGSDNAFKKFPLLSAFSVQILTVPTLTPFLVKEMNFLAMLLGCLNDIFVSCSGEDGVLQATKWERMSEISDRVMADLKFVTSHVVVSKYATHEHRELSRSWLLLMTFAQGMNRIKRETGIHIEDDNEYMHLFFVLGHSIAVIHSLLVTGTYSAANDKEIENEGTTKAGLDKCDGDGERYAKVGRLSHEDSVCTAMVSSSSSDSSIVPENKIDPFRARLPSSAIWLIRECLKVLETCLVDDEGISIFLCRNVSGSTMSWPKRKFSKVEIGRSVSSSLASSSRDPSTGLSPLCGDIQTNLSLDNVDGSNGEVQNSRRVSCNSSYPNASGVHILGLCDWPDILYDVSSQPISVHLPLHRLLSLLLQKALERCYGESALHHGVNVSHEIPQADFFSYVIGDFHPYGFSALVMEHVLRIRVFCAQVIAGMWKKNADSALVTCELYRSVCWSEQGLELDLFLLQCCGALAPADSYVNKLLDRFGLSSYLSLNPNMTNEYEAVLVQEMLALLIQILQERRFCGLSTVESLRREIIFKLATGDFTHSQLVKSLPRDLSKSDELQEVLDNVSVYCNPSGMNQGKYSLRSSCWKELDLYHPRWHSRELQSAEERFSRYCGVSAVTTQLPRWRMIYPPLKGLSRIGTCKATFQIICSTLYYALQSGSSVKSRAQDGVLISALHLLSLSLDICTQQRGSNIQACCVEDSIPILELAGLEIIGLNQGTGKESLLSLLVSLMRTREGDGLHQFPEAGSCNISSWIGNLLKKFSEIDSVCMNLLQSLAPEVVGHSVFDKATSGSASDDTRKAKARERQAAILAKMKAEQSKFLSTMSSSMDDDDLRSETETSDSVVEHDSEIAIREVCSFCHDPDSKDSVSFLIFLQKSKLLSFVNRGPPSWDQCPQSEKKIPMDEAPDLQRINVSSDSLRMISHVLQLSDDATSESATDYVLEALTARLLGNGQKEKRSSDARGKDESNLESLETAMYQTVRKKTENMINQSLTHVNHRQPDSESSSERSSVGGLSTLHRFQDIRSKQTSRYLDVSADGFHPADCDGIYLSSCGHAVHQSCLERYLNSLKERSDRRNVFEGAHIVDLVQGEFLCPACRRLANSVLPACPVDLCSVSKLQESSHAKLGRLDEQIPSLLLSEALCLLQFAANVIEDGDTLKTVSLQGDEPRRKDLQSVSNKLWNFYFSKRQEKPPGSSWLPQSIIMWDTLKCSLISMEIVTRCAKNTMLPVYGIDSLYEEFKTSKGIALSLLLRVVQSTRTKNALHVRQRFMGMKYLAESICSGISSTSSSSIFESEGAAGSWKNINLLWSRASDPVLAHDPFSSLMWALFCLPSPFITCEESLLSIVHIFYSVSVIQTVITYCAGRLCYTSELDFKENLLSDISIALRESGGWEYFRSNNMDLSCDIKETIRKYSLPFLRRCALLWRLLKTAPGKFHEEVHMFDVPSDSNSDYMDFMYSPQSELKHVDELEKMFKIPPIDTVINDELLWSSSQTWLRHFQMEYRVNRVKGPLCITPLVPFQLMKLPNLYQDLLQRYIKKPCSNCTKVIEEPALCLLCGRLCSPIWRPCCRESGCQTHAVTCGAGTGVYLLIRRTTILLQRFARQSPWPSPYLDTFGEEDIEMARGKPLYLNEERYAALTYMVGSHGLDHSSKVLNQTTIGAFLT |